Register Today!

AxonDeepSeg: A Journey through Recent Applications

Date: Wednesday, March 26, 2025
Time: 2:00 - 3:00 pm ET / 11:00 AM - 12:00 pm PT

This webinar is hosted by the Digital Pathology Working Group in collaboration with NACC.

AxonDeepSeg is free open-source software that allows morphometric analysis of axons in histology images. Digital pathology data contains an incredible wealth of information, but taking manual measurements at the cell level is time-consuming, hence the need for automatic methods.

In this talk, Armand Collin will briefly explain the principles of its deep learning-based backbone and showcase multiple recent applications on human nerve samples or animal models with his collaborators.

Agenda:

1. Context (presentation of the software, history)

2. Deep Learning for Image Segmentation

3. Recent Applications

4. Future Work

Armand Collin, BSc
PhD Student in Biomedical Engineering
Mila - Quebec Artificial Intelligence Institute
NeuroPoly Lab, Institute of Biomedical Engineering, Polytechnique Montréal

"I obtained my bachelor's degree in electrical engineering at Polytechnique Montréal and have had a growing interest in artificial intelligence ever since. I study deep learning at Mila since 2022 under the supervision of Professor Julien Cohen-Adad. I have been maintaining and contributing to AxonDeepSeg for about 4 years, improving the software and training hundreds of models."

How to Attend this webinar:
Please register using the form on this page. Upon submission, you will receive a follow-up email with relevant event information, including the Zoom link and calendar invite. Please circulate this page to anyone who would like to join.

Questions?
Please reach out to info@naccdata.org with any questions regarding this webinar.